| Season | Team | Competition | MP | G | A | Rating | ||
|---|---|---|---|---|---|---|---|---|
| 2025 | América Mineiro | Mineiro 1 | 10 | 4 | 0 | 0 | 0 | – |
| 2025 | América Mineiro | Serie B | 0 | 0 | 0 | 0 | 0 | – |
| 2024 | América Mineiro | Serie B | 6 | 1 | 0 | 0 | 0 | 6.7 |
| 2024 | Athletic Club MG | Mineiro 1 | 10 | 7 | 0 | 3 | 0 | – |
| 2024 | Athletic Club MG | Serie C | 11 | 9 | 0 | 4 | 0 | 7.3 |
| 2023 | Inter de Limeira | Paulista A1 | 11 | 1 | 0 | 3 | 0 | 6.6 |
| 2022 | Náutico | Serie B | 7 | 0 | 0 | 0 | 0 | 6.5 |
| 2021/2022 | Odisha | Indian Super League | 16 | 8 | 3 | 2 | 0 | 7.2 |
| 2020/2021 | Hatta | Pro League | 10 | 6 | 0 | 3 | 0 | – |
| 2019/2020 | Elche | Segunda División | 16 | 7 | 0 | 5 | 1 | 6.8 |
| 2019/2020 | Hannover 96 | 2. Bundesliga | 1 | 0 | 0 | 0 | 0 | 6.7 |
| 2018/2019 | Hannover 96 | Bundesliga | 10 | 3 | 1 | 3 | 0 | 6.5 |
| 2018 | Corinthians | Serie A | 7 | 1 | 0 | 0 | 0 | 6.7 |
| 2017/2018 | Hannover 96 | Bundesliga | 12 | 3 | 3 | 2 | 0 | 6.9 |
| 2017/2018 | Rubin Kazan | Premier League | 5 | 4 | 0 | 1 | 0 | 7.2 |
| 2016/2017 | Rubin Kazan | Premier League | 26 | 9 | 3 | 3 | 0 | 7.0 |
| 2015/2016 | Real Sociedad | La Liga | 27 | 7 | 2 | 7 | 0 | 6.8 |
| 2014/2015 | Elche | La Liga | 34 | 14 | 0 | 11 | 0 | – |
| 2013/2014 | Latina | Serie B | 37 | 15 | 0 | 10 | 1 | – |
| 2012/2013 | Torino | Serie A | 11 | 2 | 0 | 0 | 0 | – |
| 2012/2013 | Pescara | Serie A | 12 | 1 | 0 | 3 | 0 | – |
| 2011/2012 | Brescia | Serie B | 33 | 16 | 0 | 5 | 0 | – |
| 2010/2011 | Brescia | Serie A | 6 | 0 | 0 | 0 | 0 | – |
| 2010/2011 | AZ | Eredivisie | 11 | 3 | 0 | 1 | 0 | – |
| 2009/2010 | AZ | Eredivisie | 4 | 1 | 0 | 1 | 1 | – |
| 2008 | Cruzeiro | Serie A | 0 | 0 | 0 | 0 | 0 | – |
| 2007 | Ipatinga | Serie B | 5 | 0 | 0 | 0 | 0 | – |
| 2006 | Cruzeiro | Serie A | 6 | 0 | 0 | 0 | 0 | – |
| Total | 344 | 122 | 12 | 67 | 3 | – | ||
| Date | From | To | Type | |
|---|---|---|---|---|
| - | Athletic | América MG | N/A | |
| - | Inter Limeira | Athletic | Free | |
| 07 May 2022 | Odisha | Náutico | Free | |
| 09 Sept 2021 | Sharjah | Odisha | N/A | |
| 07 Jan 2021 | Hatta | Sharjah | N/A | |
| 02 Jan 2021 | Sharjah | Hatta | Loan | |
| - | Elche | Sharjah | Free | |
| - | Hannover | Elche | Free | |
| - | Corinthians | Hannover | N/A | |
| - | Hannover | Corinthians | Loan | |
| - | Rubin | Hannover | € 9M | |
| 08 Jan 2016 | Real Sociedad | Rubin | N/A | |
| - | Elche | Real Sociedad | € 7.2M | |
| 07 Jan 2015 | Pescara | Elche | € 1.5M | |
| - | Pescara | Elche | Loan | |
| - | Pescara | Latina | Loan | |
| 07 Jan 2013 | Torino | Pescara | N/A | |
| - | Pescara | Torino | Loan | |
| 08 Aug 2012 | Brescia | Pescara | € 3.7M | |
| 02 Jan 2011 | AZ | Brescia | € 300K | |
| 01 Jan 2009 | Cruzeiro | AZ | € 600K | |
| 01 Jan 2007 | Cruzeiro | Ipatinga | Loan |
Jonathas career history shows progression across clubs and competitions, including club timeline, national team appearances and overall career totals.